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Publications

In-depth mining of the immunopeptidome of an acute myeloid leukemia cell line using complementary ligand enrichment and data acquisition strategies

Pandey K. et al, (2020), Molecular Immunology, 123, 7 - 17

The Choice of HLA-Associated Peptide Enrichment and Purification Strategy Affects Peptide Yields and Creates a Bias in Detected Sequence Repertoire.

Nicastri A. et al, (2020), Proteomics

Identification of an Unconventional Subpeptidome Bound to the Behçet's Disease-associated HLA-B*51:01 that is Regulated by Endoplasmic Reticulum Aminopeptidase 1 (ERAP1).

Chen L. et al, (2020), Molecular & cellular proteomics : MCP, 19, 871 - 883

Extended Analysis Identifies Drug-Specific Association of Two Distinct HLA Class II Haplotypes for Development of Immunogenicity to Adalimumab and Infliximab.

Powell Doherty RD. et al, (2020), Gastroenterology

Identification of antigens presented by MHC for vaccines against tuberculosis.

Bettencourt P. et al, (2020), NPJ Vaccines, 5

NNAlign_MA; MHC peptidome deconvolution for accurate MHC binding motif characterization and improved T cell epitope predictions.

Alvarez B. et al, (2019), Molecular & cellular proteomics : MCP

LTR retroelement expansion of the human cancer transcriptome and immunopeptidome revealed by de novo transcript assembly.

Attig J. et al, (2019), Genome research, 29, 1578 - 1590

Mass spectrometry–based identification of MHC-bound peptides for immunopeptidomics

Purcell AW. et al, (2019), Nature Protocols, 14, 1687 - 1707

NOD2 and TLR2 Signal via TBK1 and PI31 to Direct Cross-Presentation and CD8T Cell Responses

Corridoni D. et al, (2019), FRONTIERS IN IMMUNOLOGY, 10

MS-Rescue: A Computational Pipeline to Increase the Quality and Yield of Immunopeptidomics Experiments.

Andreatta M. et al, (2019), Proteomics, 19, e1800357 - e1800357

Targeting Mutated Plus Germline Epitopes Confers Pre-clinical Efficacy of an Instantly Formulated Cancer Nano-Vaccine.

Mohsen MO. et al, (2019), Front Immunol, 10

A subset of HLA-I peptides are not genomically templated: Evidence for cis- and trans-spliced peptide ligands.

Faridi P. et al, (2018), Sci Immunol, 3

Identification of Native and Posttranslationally Modified HLA-B*57:01-Restricted HIV Envelope Derived Epitopes Using Immunoproteomics.

Ramarathinam SH. et al, (2018), Proteomics, 18

Immunopeptidomic Profiling of HLA-A2-Positive Triple Negative Breast Cancer Identifies Potential Immunotherapy Target Antigens.

Ternette N. et al, (2018), Proteomics, 18, e1700465 - e1700465

Immunopeptidomics Special Issue.

Ternette N. and Purcell AW., (2018), Proteomics, 18

Minimal Information About an Immuno-Peptidomics Experiment (MIAIPE).

Lill JR. et al, (2018), Proteomics, 18

The SysteMHC Atlas project

Shao W. et al, (2018), Nucleic Acids Research, 46, D1237 - D1247

Protective efficacy and immunogenicity of an adenoviral vector vaccine encoding the codon-optimized F protein of respiratory syncytial virus.

Kohlmann R. et al, (2009), J Virol, 83, 12601 - 12610

Immunogenicity and efficacy of codon optimized DNA vaccines encoding the F-protein of respiratory syncytial virus.

Ternette N. et al, (2007), Vaccine, 25, 7271 - 7279

Expression of RNA virus proteins by RNA polymerase II dependent expression plasmids is hindered at multiple steps.

Ternette N. et al, (2007), Virol J, 4

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